LambdaActivation
The LambdaActivation step controls the lambda parameter for alchemical transformations or free energy calculations. It allows for gradual changes in lambda according to a predefined schedule.
type:
FlowControl,LambdaActivationparameters:
lambdaValueStep:int: Number of steps between lambda value changeslambdaValues:real[]: List of lambda values to cycle through
Example:
"lambdaActivation":{
"type":["FlowControl","LambdaActivation"],
"parameters":{
"lambdaValueStep": 1000,
"lambdaValues": [0.0, 0.2, 0.4, 0.6, 0.8, 1.0]
}
}
Note
This step is useful for free energy calculations and alchemical transformations.
Warning
Ensure that your forcefield and integrator support lambda-dependent interactions when using this step.