non excluded

Note

For a description of the common aspects of conditions, including their usage and shared parameters (cutOff, cutOffVerletFactor), please refer to the general conditions documentation.

This condition generates one Verlet list only.

It is ensured that if a pairs is given in the exclusions list, it will not be in the Verlet list. To access the Verlet list, use the label "nonExcluded" in the "condition" option of the potential.

To introduce the exclusion list, we use the "labels" and "data" fields of the DataEntry. In the labels field, we have to specify two columns, named "id" and "id_list". The "id" column contains the id of the particle, and the "id_list" column contains the list of ids of the particles that are excluded from the Verlet list.

For example if we want the particle with id 0 do not interact with the particles with id 1,2,3 we have to specify the following data:

"data":[
   [0,[1,2,3]],
   [1,[0]],
   [2,[0]],
   [3,[0]],
   ["...","..."]
]

Warning

If the particle with id 0 is excluded from the Verlet list of the particle with id 1, it does not mean that the particle with id 1 is excluded from the Verlet list of the particle with id 0. This has to be written explicitly in the data. If the given exclusion list is not symmetric, the code will raise an error.

---

• type: VerletConditionalListSet, nonExcluded.

• parameters:

  • cutOff : float, optional, default: 0.

  • cutOffVerletFactor : float, optional, default: 1.1 .

• data:

  id	id_list
  int	[int, int , …]

---

Example:

"entryName":{
  "type":["VerletConditionalListSet","nonExcluded"]
  "parameters":{
    "cutOff":1.0,
    "cutOffVerletFactor":1.2
  },
  "labels":["id","id_list"],
  "data":[
     [0,[1,2,3]],
     [1,[0,2,3]],
     [2,[0,1,3]],
     [3,[0,1,2]],
     ["...","..."]
  ]
}